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Low polymorphisms in pfact, pfugt and pfcarl genes in African Plasmodium falciparum isolates and absence of association with susceptibility to common anti-malarial drugs

Identifieur interne : 000012 ( France/Analysis ); précédent : 000011; suivant : 000013

Low polymorphisms in pfact, pfugt and pfcarl genes in African Plasmodium falciparum isolates and absence of association with susceptibility to common anti-malarial drugs

Auteurs : Francis Tsombeng Foguim [France] ; Marie Gladys Robert [France] ; Mamadou Wague Gueye [Sénégal] ; Mathieu Gendrot [France] ; Silman Diawara [Sénégal] ; Joel Mosnier [France] ; Remy Amalvict [France] ; Nicolas Benoit [France] ; Raymond Bercion [Sénégal] ; Bécaye Fall [Sénégal] ; Marylin Madamet [France] ; Bruno Pradines [France] ; The French National Reference Centre For Imported Malaria Study Group ; Yvon Sterkers [France]

Source :

RBID : Hal:hal-02408550

English descriptors

Abstract

Resistance to all available anti-malarial drugs has emerged and spread including artemisinin derivatives and their partner drugs. Several genes involved in artemisinin and partner drugs resistance, such as pfcrt, pfmdr1, pfK13 or pfpm2, have been identified. However, these genes do not properly explain anti-malarial drug resistance, and more particularly clinical failures observed in Africa. Mutations in genes encoding for Plasmodium falciparum proteins, such as P. falciparum Acetyl-CoA transporter (PfACT), P. falciparum UDP-galactose transporter (PfUGT) and P. falciparum cyclic amine resistance locus (PfCARL) have recently been associated to resistance to imidazolopiperazines and other unrelated drugs.METHODS:Mutations on pfugt, pfact and pfcarl were characterized on 86 isolates collected in Dakar, Senegal and 173 samples collected from patients hospitalized in France after a travel in African countries from 2015 and 2016 to assess their potential association with ex vivo susceptibility to chloroquine, quinine, lumefantrine, monodesethylamodiaquine, mefloquine, dihydroartemisinin, artesunate, doxycycline, pyronaridine and piperaquine.RESULTS:No mutations were found on the genes pfugt and pfact. None of the pfcarl described mutations were identified in these samples from Africa. The K784N mutation was found in one sample and the K734M mutation was identified on 7.9% of all samples for pfcarl. The only significant differences in ex vivo susceptibility according to the K734M mutation were observed for pyronaridine for African isolates from imported malaria and for doxycycline for Senegalese parasites.CONCLUSION:No evidence was found of involvement of these genes in reduced susceptibility to standard anti-malarial drugs in African P. falciparum isolates.


Url:
DOI: 10.1186/s12936-019-2919-3


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Hal:hal-02408550

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<org type="regroupinstitution" xml:id="struct-301247" status="VALID">
<orgName>Réseau International des Instituts Pasteur</orgName>
<orgName type="acronym">RIIP</orgName>
<desc>
<address>
<addrLine>25, rue du Dr Roux 75724 Paris Cedex 15</addrLine>
<country key="FR"></country>
</address>
<ref type="url">https://research.pasteur.fr/ip-network</ref>
</desc>
</org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>Sénégal</country>
</affiliation>
</author>
<author>
<name sortKey="Fall, Becaye" sort="Fall, Becaye" uniqKey="Fall B" first="Bécaye" last="Fall">Bécaye Fall</name>
<affiliation wicri:level="1">
<hal:affiliation type="institution" xml:id="struct-338318" status="VALID">
<orgName>Hôpital Principal de Dakar</orgName>
<desc>
<address>
<addrLine> 1, avenue Nelson Mandéla - B.P. 3006 - DAKAR (Sénégal)</addrLine>
<country key="SN"></country>
</address>
<ref type="url">http://www.hopitalprincipal.sn/</ref>
</desc>
</hal:affiliation>
<country>Sénégal</country>
</affiliation>
</author>
<author>
<name sortKey="Madamet, Marylin" sort="Madamet, Marylin" uniqKey="Madamet M" first="Marylin" last="Madamet">Marylin Madamet</name>
<affiliation wicri:level="1">
<hal:affiliation type="institution" xml:id="struct-342179" status="VALID">
<orgName>Institut de Recherche Biomédicale des Armées [Antenne Marseille]</orgName>
<orgName type="acronym">IRBA</orgName>
<desc>
<address>
<addrLine>Marseille</addrLine>
<country key="FR"></country>
</address>
</desc>
</hal:affiliation>
<country>France</country>
</affiliation>
</author>
<author>
<name sortKey="Pradines, Bruno" sort="Pradines, Bruno" uniqKey="Pradines B" first="Bruno" last="Pradines">Bruno Pradines</name>
<affiliation wicri:level="1">
<hal:affiliation type="laboratory" xml:id="struct-37966" status="VALID">
<orgName>Institut de Médecine Tropicale du Service de Santé des Armées</orgName>
<orgName type="acronym">IMTSSA</orgName>
<desc>
<address>
<addrLine>BP 50 13998 Marseille Armées.</addrLine>
<country key="FR"></country>
</address>
</desc>
<listRelation>
<relation active="#struct-300092" type="direct"></relation>
</listRelation>
<tutelles>
<tutelle active="#struct-300092" type="direct">
<org type="institution" xml:id="struct-300092" status="VALID">
<orgName>Service de Santé des Armées</orgName>
<desc>
<address>
<country key="FR"></country>
</address>
</desc>
</org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>France</country>
</affiliation>
</author>
<author>
<name sortKey="Group, The French National Reference Centre For Imported Malaria Study" sort="Group, The French National Reference Centre For Imported Malaria Study" uniqKey="Group " first=" The French National Reference Centre For Imported Malaria Study" last="Group"> The French National Reference Centre For Imported Malaria Study Group</name>
</author>
<author>
<name sortKey="Sterkers, Yvon" sort="Sterkers, Yvon" uniqKey="Sterkers Y" first="Yvon" last="Sterkers">Yvon Sterkers</name>
<affiliation wicri:level="1">
<hal:affiliation type="laboratory" xml:id="struct-166573" status="VALID">
<idno type="RNSR">201119437J</idno>
<orgName>Maladies infectieuses et vecteurs : écologie, génétique, évolution et contrôle</orgName>
<orgName type="acronym">MIVEGEC</orgName>
<desc>
<address>
<addrLine>911 Avenue Agropolis BP 64501 34394 Montpellier cedex 5</addrLine>
<country key="FR"></country>
</address>
<ref type="url">http://www.mivegec.ird.fr/</ref>
</desc>
<listRelation>
<relation name="224" active="#struct-451860" type="direct"></relation>
<relation name="UMR5290" active="#struct-441569" type="direct"></relation>
<relation name="UMR5290" active="#struct-410122" type="direct"></relation>
</listRelation>
<tutelles>
<tutelle name="224" active="#struct-451860" type="direct">
<org type="institution" xml:id="struct-451860" status="VALID">
<orgName>Institut de Recherche pour le Développement</orgName>
<orgName type="acronym">IRD [France-Sud]</orgName>
<desc>
<address>
<addrLine>911 avenue Agropolis,BP 6450134394 Montpellier cedex 5</addrLine>
<country key="FR"></country>
</address>
<ref type="url">http://www.france-sud.ird.fr/</ref>
</desc>
</org>
</tutelle>
<tutelle name="UMR5290" active="#struct-441569" type="direct">
<org type="institution" xml:id="struct-441569" status="VALID">
<idno type="IdRef">02636817X</idno>
<idno type="ISNI">0000000122597504</idno>
<orgName>Centre National de la Recherche Scientifique</orgName>
<orgName type="acronym">CNRS</orgName>
<date type="start">1939-10-19</date>
<desc>
<address>
<country key="FR"></country>
</address>
<ref type="url">http://www.cnrs.fr/</ref>
</desc>
</org>
</tutelle>
<tutelle name="UMR5290" active="#struct-410122" type="direct">
<org type="institution" xml:id="struct-410122" status="VALID">
<idno type="ISNI">0000000120970141</idno>
<orgName>Université de Montpellier</orgName>
<orgName type="acronym">UM</orgName>
<desc>
<address>
<addrLine>163 rue Auguste Broussonnet - 34090 Montpellier</addrLine>
<country key="FR"></country>
</address>
<ref type="url">http://www.umontpellier.fr/</ref>
</desc>
</org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>France</country>
</affiliation>
</author>
</analytic>
<idno type="DOI">10.1186/s12936-019-2919-3</idno>
<series>
<title level="j">Malaria Journal</title>
<idno type="ISSN">1475-2875</idno>
<imprint>
<date type="datePub">2019-12</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc>
<textClass>
<keywords scheme="mix" xml:lang="en">
<term>Anti-malarial drug</term>
<term>In vitro</term>
<term>Malaria</term>
<term>Molecular marker</term>
<term>PfACT</term>
<term>PfCARL</term>
<term>PfUGT</term>
<term>Plasmodium falciparum</term>
<term>Resistance</term>
</keywords>
</textClass>
</profileDesc>
</teiHeader>
<front>
<div type="abstract" xml:lang="en">
<p>Resistance to all available anti-malarial drugs has emerged and spread including artemisinin derivatives and their partner drugs. Several genes involved in artemisinin and partner drugs resistance, such as pfcrt, pfmdr1, pfK13 or pfpm2, have been identified. However, these genes do not properly explain anti-malarial drug resistance, and more particularly clinical failures observed in Africa. Mutations in genes encoding for Plasmodium falciparum proteins, such as P. falciparum Acetyl-CoA transporter (PfACT), P. falciparum UDP-galactose transporter (PfUGT) and P. falciparum cyclic amine resistance locus (PfCARL) have recently been associated to resistance to imidazolopiperazines and other unrelated drugs.METHODS:Mutations on pfugt, pfact and pfcarl were characterized on 86 isolates collected in Dakar, Senegal and 173 samples collected from patients hospitalized in France after a travel in African countries from 2015 and 2016 to assess their potential association with ex vivo susceptibility to chloroquine, quinine, lumefantrine, monodesethylamodiaquine, mefloquine, dihydroartemisinin, artesunate, doxycycline, pyronaridine and piperaquine.RESULTS:No mutations were found on the genes pfugt and pfact. None of the pfcarl described mutations were identified in these samples from Africa. The K784N mutation was found in one sample and the K734M mutation was identified on 7.9% of all samples for pfcarl. The only significant differences in ex vivo susceptibility according to the K734M mutation were observed for pyronaridine for African isolates from imported malaria and for doxycycline for Senegalese parasites.CONCLUSION:No evidence was found of involvement of these genes in reduced susceptibility to standard anti-malarial drugs in African P. falciparum isolates.</p>
</div>
</front>
</TEI>
<affiliations>
<list>
<country>
<li>France</li>
<li>Sénégal</li>
</country>
<region>
<li>Auvergne-Rhône-Alpes</li>
<li>Rhône-Alpes</li>
</region>
<settlement>
<li>Grenoble</li>
</settlement>
<orgName>
<li>Université Grenoble-Alpes</li>
</orgName>
</list>
<tree>
<noCountry>
<name sortKey="Group, The French National Reference Centre For Imported Malaria Study" sort="Group, The French National Reference Centre For Imported Malaria Study" uniqKey="Group " first=" The French National Reference Centre For Imported Malaria Study" last="Group"> The French National Reference Centre For Imported Malaria Study Group</name>
</noCountry>
<country name="France">
<noRegion>
<name sortKey="Foguim, Francis Tsombeng" sort="Foguim, Francis Tsombeng" uniqKey="Foguim F" first="Francis Tsombeng" last="Foguim">Francis Tsombeng Foguim</name>
</noRegion>
<name sortKey="Amalvict, Remy" sort="Amalvict, Remy" uniqKey="Amalvict R" first="Remy" last="Amalvict">Remy Amalvict</name>
<name sortKey="Benoit, Nicolas" sort="Benoit, Nicolas" uniqKey="Benoit N" first="Nicolas" last="Benoit">Nicolas Benoit</name>
<name sortKey="Gendrot, Mathieu" sort="Gendrot, Mathieu" uniqKey="Gendrot M" first="Mathieu" last="Gendrot">Mathieu Gendrot</name>
<name sortKey="Madamet, Marylin" sort="Madamet, Marylin" uniqKey="Madamet M" first="Marylin" last="Madamet">Marylin Madamet</name>
<name sortKey="Mosnier, Joel" sort="Mosnier, Joel" uniqKey="Mosnier J" first="Joel" last="Mosnier">Joel Mosnier</name>
<name sortKey="Pradines, Bruno" sort="Pradines, Bruno" uniqKey="Pradines B" first="Bruno" last="Pradines">Bruno Pradines</name>
<name sortKey="Robert, Marie Gladys" sort="Robert, Marie Gladys" uniqKey="Robert M" first="Marie Gladys" last="Robert">Marie Gladys Robert</name>
<name sortKey="Sterkers, Yvon" sort="Sterkers, Yvon" uniqKey="Sterkers Y" first="Yvon" last="Sterkers">Yvon Sterkers</name>
</country>
<country name="Sénégal">
<noRegion>
<name sortKey="Gueye, Mamadou Wague" sort="Gueye, Mamadou Wague" uniqKey="Gueye M" first="Mamadou Wague" last="Gueye">Mamadou Wague Gueye</name>
</noRegion>
<name sortKey="Bercion, Raymond" sort="Bercion, Raymond" uniqKey="Bercion R" first="Raymond" last="Bercion">Raymond Bercion</name>
<name sortKey="Diawara, Silman" sort="Diawara, Silman" uniqKey="Diawara S" first="Silman" last="Diawara">Silman Diawara</name>
<name sortKey="Fall, Becaye" sort="Fall, Becaye" uniqKey="Fall B" first="Bécaye" last="Fall">Bécaye Fall</name>
</country>
</tree>
</affiliations>
</record>

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